This section provides general information on the information i MobiDB: a database of protein disorder and mobility annotations More.MobiDB i Protein-protein interaction databases STRING i X52983 Genomic DNA Translation: CAA37175.1 Different initiation. PROSITE a protein domain and family database More.PROSITE i TIGRFAMs a protein family database More.TIGRFAMs i Superfamily database of structural and functional annotation More.SUPFAM i Protein Motif fingerprint database a protein domain database More.PRINTS i Integrated resource of protein families, domains and functional sites More.InterPro i HAMAP database of protein families More.HAMAP i Gene3D Structural and Functional Annotation of Protein Families More.Gene3D i
Identification of Orthologs from Complete Genome Data More.OMA iĭatabase for complete collections of gene phylogenies More.PhylomeDB i InParanoid: Eukaryotic Ortholog Groups More.InParanoid i
The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms More.HOGENOM i
Curated Phylogenomic databasesĮvolutionary genealogy of genes: Non-supervised Orthologous Groups More.eggNOG i This subsection of the 'Family and domains' section provides information about the sequence similarity with other similarities iīelongs to the sigma-70 factor family. This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those bias iīasic and acidic residues Sequence analysis Interaction with polymerase core subunit RpoC This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological i Sigma-70 factor domain-4 UniRule annotation Sigma-70 factor domain-3 UniRule annotation Sigma-70 factor domain-2 UniRule annotation
#Siga hrd manual#
Information which has been generated by the UniProtKB automatic annotation system, without manual validation.Īutomatic assertion according to sequence analysis iīinds RNA polymerase-binding protein RbpA Add BLAST This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other i This section provides information on sequence similarities with other proteins and the domain(s) present in a & Domains i Region Feature key It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed lineage iĬellular organisms › Bacteria › Terrabacteria group › Actinobacteria › Actinomycetia › Streptomycetales › Streptomycetaceae › Streptomyces › Streptomyces albidoflavus group › Streptomyces coelicolor This subsection of the Names and taxonomy section contains the taxonomic hierarchical classification lineage of the source organism. This is known as the 'taxonomic identifier' or 'taxid'.More.Taxonomic identifier i This subsection of the Names and taxonomy section shows the unique identifier assigned by the NCBI to the source organism of the protein. Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) This subsection of the Names and taxonomy section provides information on the name(s) of the organism that is the source of the protein i
#Siga hrd code#
More information in the GO evidence code guide Used to indicate a direct assay for the function, process or component indicated by the GO term.